Ferry from Agathonissi to Pythagorio (Samos)

Agathonissi to Pythagorio is a short northward hop across to Samos, taking around thirty-five minutes on the Dodekanisos Pride and a little over an hour on the SAOS boat Saonisos. It is one of the few links between the northern Dodecanese and the Northeast Aegean islands, and a useful way of joining the two groups without backtracking to Kos or Rhodes.

Pythagorio sits on the south coast of Samos, a small harbour town named after the island's most famous son. It is more relaxed than Vathy, the island's main port, with a yacht and fishing harbour overlooked by Logothetis Castle. The ancient Heraion and the Eupalinos tunnel, a UNESCO-listed aqueduct bored through a hillside in the sixth century BC, are both within easy reach.

Sailings run roughly every other day across a fortnight in season, and the service thins outside it. The current timetable and fares are shown in the table below, with tickets from around €16. Bear in mind that ferry connections from Pythagorio are more limited than from Vathy, so plan any onward leg from Samos carefully.

Agathonissi to Pythagorio Ferry Fares

Weekly Agathonissi to Pythagorio Ferry Schedule

The repeating pattern behind the dated timetable, without dates. Each row is one scheduled departure and the days it runs.

Hiring a car

Can you rent a car in Pythagorio?

Yes, several agencies have offices right in Pythagorio, and more are based just 3km away at Samos airport on the same south coast, about a 10-minute taxi ride apart. A car is worth having to reach the north coast and inland villages, since bus coverage on Samos is limited outside the main towns. Compare local prices at Discover Cars.

Next 14 days

Every scheduled departure from Agathonissi to Pythagorio between 3 October 2026 and 16 October 2026.

Frequently Asked Questions

Tips for the Agathonissi to Pythagorio ferry

• On conventional ferries, the centre of the vessel at the waterline is the most stable point; if you feel unwell, move there and focus on the horizon.
• The price difference between a reserved seat and deck class is minimal on a short hop; deck class is almost always sufficient.
• On very small short-hop ferries, bicycles are usually carried for a small fee – a great way to explore an island in a single day.
• Booking a multi-leg island-hopping itinerary in one session lets you verify that your connections are realistic before committing.
• Smoking is not permitted inside ferry terminals or on board vessels in enclosed areas; designated smoking areas are usually at the stern on open deck.

Plan a journey

Search for a connection between any two Greek ports, including journeys that need a change.